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Variance Components
Estimate variance components
Evaluations
Run genetic evaluations
Inbreeding
Manage inbreeding
Genomic Processing
Process SNP data
GWAS
Genome-wide association
Imputation
Impute missing genotypes
Breed Composition
Estimate breed percentages
Simulation
Simulate breeding programs
Selection Index
Design selection schemes
Miscellaneous
Other useful tools

Miscellaneous Software

Other useful tools for statistical genetics and breeding analysis

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OpenMendel

Julia implementation of statistical genetics analysis. Modern, high-performance platform.

JuliaStatistical Genetics
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