Imputation Software
Tools for imputing missing genotypes and phasing
✓ Active
Beagle
Imputation software for predicting missing genotype calls. Widely used standard.
ImputationGenotyping
✓ Active
AlphaImpute
John Hickey (Roslin Institute)
Part of the Alpha Suite. Imputes genotypes using pedigree and sequence information.
ImputationAlpha Suite
✓ Active
AlphaPeel
John Hickey (Roslin Institute)
Part of the Alpha Suite. Advanced imputation and phasing.
ImputationPhasingAlpha Suite